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Research paper | Open Access

Developing superior alleles of yield genes in rice by artificial mutagenesis using the CRISPR/Cas9 system

Liyu Huanga,1Ru Zhangb,1,Guangfu HuangaYanxia LicGetachew MelakuaShilai ZhangaHaitao ChenbYanjuan ZhaoaJing ZhangaYesheng Zhangb,c( )Fengyi Hua( )
State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan/Research Center for Perennial Rice Engineering and Technology of Yunnan/School of Agriculture, Yunnan University, Kunming 650091, Yunnan, China
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, Yunnan, China
BGI-Baoshan, Baoshan 678004, Yunnan, China

1 Contributed equally to this work.

Peer review under responsibility of Crop Science Society of China and Institute of Crop Science, CAAS.

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Abstract

Rice yield is an important and complex agronomic trait controlled by multiple genes. In recent decades, dozens of yield-associated genes in rice have been cloned, many of which can increase production in the form of loss or degeneration of function. However, mutations occurring randomly under natural conditions have provided very limited genetic resources for yield increases. In this study, potentially yield-increasing alleles of two genes closely associated with yield were edited artificially. The recently developed CRISPR/Cas9 system was used to edit two yield genes: Grain number 1a (Gn1a) and DENSE AND ERECT PANICLE1 (DEP1). Several mutants were identified by a target sequence analysis. Phenotypic analysis confirmed one mutant allele of Gn1a and three of DEP1 conferring yield superior to that conferred by other natural high-yield alleles. Our results demonstrate that favorable alleles of the Gnla and DEP1 genes, which are considered key factors in rice yield increases, could be developed by artificial mutagenesis using genome editing technology.

The Crop Journal
Pages 475-481
Cite this article:
Huang L, Zhang R, Huang G, et al. Developing superior alleles of yield genes in rice by artificial mutagenesis using the CRISPR/Cas9 system. The Crop Journal, 2018, 6(5): 475-481. https://doi.org/10.1016/j.cj.2018.05.005

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Received: 16 March 2018
Revised: 29 May 2018
Accepted: 17 June 2018
Published: 27 July 2018
© 2018 Crop Science Society of China and Institute of Crop Science, CAAS.

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

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