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Research paper

Chloroplast gene matK holds the barcodes for identification of Momordica (Cucurbitaceae) species from Indian subcontinent

Girme Aoudumbar RameshaDeepu Mathewa,c ( )K. Joseph JohnbV. Ravisankarc
Centre for Plant Biotechnology and Molecular Biology, Kerala Agricultural University, Thrissur, Kerala State 680 656, India
ICAR-National Bureau of Plant Genetic Resources, Regional Station, Thrissur, Kerala State 680 656, India
Bioinformatics Centre, Kerala Agricultural University, Thrissur, Kerala State, 680 656, India

Peer review under responsibility of Chinese Society for Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS)

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Abstract

DNA barcoding is a supplementary tool in plant systematics, extensively used to resolve the species level controversies. This paper details the identification of DNA barcodes for seven species of Momordica, using the chloroplast gene matK. Since the species M. cymbalaria has been confused as a member of the genus Luffa, 26 accessions of Momordica belonging to seven Indian species and two accessions of Luffa acutangula were included in this study. Analysis of matK sequences has yielded distinct barcodes in M. charantia var. subsp. and also in Luffa acutangula. Evolutionary status of each species was reflected as nucleotide polymorphisms in each sequence. The wild species M. dioica and M. sahyadrica have yielded one barcode but failed to get differentiated. Further, this study provides conclusive proof that M. cymbalaria is a member of Momordica genus. The phylogram generated was successful to distinguish the monoecious species of this genus, M. charantia, M. balsamina and M. cymbalaria, from the dioecious species M. dioica, M. sahyadrica, M. subangulata subsp. renigera and M. cochinchinensis. Thus, matK locus, by accumulating the evolutionary sequence variations, is proven efficient to differentiate the Momordica species and to reveal their relatedness.

Horticultural Plant Journal
Pages 89-98
Cite this article:
Ramesh GA, Mathew D, John KJ, et al. Chloroplast gene matK holds the barcodes for identification of Momordica (Cucurbitaceae) species from Indian subcontinent. Horticultural Plant Journal, 2022, 8(1): 89-98. https://doi.org/10.1016/j.hpj.2021.04.001

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Received: 17 May 2020
Revised: 08 December 2020
Accepted: 03 February 2021
Published: 10 April 2021
© 2021 Chinese Society for Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS).

This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/)

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