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Research paper

Transcriptome and metabolomics analysis revealed that CmWRKY49 regulating CmPSY1 promotes β-carotene accumulation in orange fleshed oriental melon

Xiaoyu DuanaCai JiangbYaping ZhaoaGe GaoaMeng LiaHongyan Qia( )
Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, College of Horticulture, Shenyang Agricultural University, National and Local Joint Engineering Research Centre of Northern Horticultural, Facilities Design and Application Technology (Liaoning), Shenyang 110866, China
Nanodigmbio Biotechnology Co., Ltd. Nanjing 210038, China

Peer review under responsibility of Chinese Society of Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS)

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Abstract

The flesh color of oriental melons is an important commercial trait that affects consumer preferences. To explore the mechanisms underlying the flesh color formation and regulation during fruit ripening, carotenoid-targeted metabolomic and RNA-seq analysis were conducted between white-fleshed (WF) and orange-fleshed (OF) oriental melon cultivars at different stages. The carotenoid-targeted metabolomic analysis indicated that β-carotene was the major metabolite that caused differences in flesh color between the two cultivars. Additionally, through KEGG pathway enrichment and weighted gene co-expression network (WGCNA) analysis, metabolic pathways and related transcription factors that are associated with carotenoid metabolism were selected and transcriptome data was verified using RT-qPCR. Finally, the yeast one hybrid and luciferase activity showed that the transcription factor CmWRKY49 could directly bind to the CmPSY1 promoter to activate its expression in the ‘OF’ cultivar. Transient overexpression of CmWRKY49 in ‘OF’ cultivar increased the β-carotene content, while the β-carotene content decreased when it was silenced in the same cultivar. This study provides insights into the underlying regulatory network of carotenoid metabolism in oriental melon fruit.

Horticultural Plant Journal
Pages 650-666
Cite this article:
Duan X, Jiang C, Zhao Y, et al. Transcriptome and metabolomics analysis revealed that CmWRKY49 regulating CmPSY1 promotes β-carotene accumulation in orange fleshed oriental melon. Horticultural Plant Journal, 2022, 8(5): 650-666. https://doi.org/10.1016/j.hpj.2022.07.005

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Received: 17 April 2022
Revised: 15 June 2022
Accepted: 01 July 2022
Published: 21 July 2022
© 2022 Chinese Society for Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS).

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

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