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Research paper | Open Access

Comparative transcriptome analysis of the climacteric of apple fruit uncovers the involvement of transcription factors affecting ethylene biosynthesis

Tong Lia,b,Xiao ZhangbYun WeibYaxiu XubWeiting LiubHongjian Lib,cGuangxin YangbAide Wangb( )Xiaoxue Wanga( )
Rice Research Institute, Shenyang Agricultural University, Shenyang, Liaoning 110866, China
College of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning 110866, China
Liaoning Institute of Pomology, Xiongyue, Liaoning, 115009, China

Peer review under responsibility of Chinese Society of Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS)

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Abstract

Apple (Malus domestica) fruit generally undergoes a climacteric. During its ripening process, there is a peak in ethylene release and its firmness simultaneously decreases. Although more in-depth research into the mechanism of climacteric-type fruit ripening is being carried out, some aspects remain unclear. In this study, we compared the transcriptomes of 0-Pre and 15-Post (pre- and post-climacteric fruit), and 15-Post and 15-MCP [fruit treated with 1-MCP (1-methylcyclopropene)]. Various transcription factors, such as MADS-box, ERF, NAC, Dof and SHF were identified among the DEGs (differential gene expressions). Furthermore, these transcription factors were selected for further validation analysis by qRT-PCR. Moreover, yeast one hybrid (Y1H), β-glucuronidase (GUS) transactivation assay and dual-luciferase reporter assay showed that MdAGL30, MdAGL104, MdERF008, MdNAC71, MdDof1.2, MdHSFB2a and MdHSFB3 bound to MdACS1 promoter and directly regulated its transcription, thereby regulating ethylene biosynthesis in apple fruit. Our results provide useful information and new insights for research on apple fruit ripening.

Horticultural Plant Journal
Pages 659-669
Cite this article:
Li T, Zhang X, Wei Y, et al. Comparative transcriptome analysis of the climacteric of apple fruit uncovers the involvement of transcription factors affecting ethylene biosynthesis. Horticultural Plant Journal, 2023, 9(4): 659-669. https://doi.org/10.1016/j.hpj.2022.12.002

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Received: 02 August 2022
Revised: 24 October 2022
Accepted: 31 October 2022
Published: 12 December 2022
© 2023 Chinese Society for Horticultural Science (CSHS) and Institute of Vegetables and Flowers (IVF), Chinese Academy of Agricultural Sciences (CAAS).

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

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