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Original Article | Open Access

The mutational pattern of homologous recombination (HR)-associated genes and its relevance to the immunotherapeutic response in gastric cancer

Yue Fan1,*Haifeng Ying2,*Xueying Wu3Huan Chen3Ying Hu4Henghui Zhang3Lijia Wu3Ying Yang3Beibei Mao3 ( )Lan Zheng2 ( )
Department of integrated Traditional Chinese Medicine and Western Medicine, Zhongshan Hospital, Fudan University, Shanghai 200032, China
Department of Traditional Chinese Medicine, Ruijin Hospital, Shanghai Jiaotong University, Shanghai 200025, China
Genecast Precision Medicine Technology Institute, Beijing 100191, China
Center of Integrative Medicine, Beijing Ditan Hospital, Capital Medical University, Beijing 100015, China

*These authors contributed equally to this work.

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Abstract

Objective

Currently, there is an urgent need to identify immunotherapeutic biomarkers to increase the benefit of immune checkpoint inhibitors (ICIs) for patients with gastric cancer (GC). Homologous recombination deficiency (HRD) can modify the tumor immune microenvironment by increasing the presence of tumor-infiltrating lymphocytes and therefore might serve as a biomarker of immunotherapeutic response. We aimed to analyze the mutational pattern of HR-associated genes in Chinese patients with GC and its relevance to the tumor immune profile and clinical immunotherapeutic response.

Methods

A panel of 543 cancer-associated genes was used to analyze genomic profiles in a cohort comprising 484 Chinese patients with GC. Correlations between HR gene mutations and tumor immunity or clinical outcomes were identified via bioinformatic analysis using 2 GC genomic datasets (TCGA and MSK-IMPACT).

Results

Fifty-one of the 484 (10.54%) patients carried at least one somatic mutation in an HR gene; ATM (16/484, 3.31%) was among the most frequently mutated HR genes in the Chinese cohort. Mutations in HR genes were associated with elevated tumor mutational burden, enhanced immune activity, and microsatellite instability status. In the MSK-IMPACT cohort comprising 49 patients with stomach adenocarcinoma or gastroesophageal junction adenocarcinoma treated with ICIs, patients with HR-mut GC (n = 12) had significantly better overall survival than those with HR-wt GC (n = 37) (log-rank test, P < 0.05).

Conclusions

Our data suggest that detection of somatic mutations in HR genes might aid in identifying patients who might benefit from immune checkpoint blockade therapy.

Electronic Supplementary Material

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Cancer Biology & Medicine
Pages 1002-1013
Cite this article:
Fan Y, Ying H, Wu X, et al. The mutational pattern of homologous recombination (HR)-associated genes and its relevance to the immunotherapeutic response in gastric cancer. Cancer Biology & Medicine, 2020, 17(4): 1002-1013. https://doi.org/10.20892/j.issn.2095-3941.2020.0089

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Received: 03 March 2020
Accepted: 19 June 2020
Published: 15 November 2020
©2020 Cancer Biology & Medicine.

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