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Research Article | Open Access | Just Accepted

Transcriptome and proteome analysis reveals the characteristics of carbon metabolism in the mycelial development of Gomphus purpuraceus

Yangyang Genga,b,cShixin Zhangb,cYana Liub,cLikang Qind,e( )

a Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), College of Life Sciences/Institute of Agro-bioengineering, Guizhou University, Guiyang, Guizhou 550025, China.

b Guizhou Institute of Walnut, Guiyang, Guizhou 550025, China.

c Guizhou Academy of Forestry, Guiyang, Guizhou 550025, China.

d School of Liquor and Food Engineering, Guizhou University, Guiyang, Guizhou 550025, China.

e Guizhou Industrial Technology Research Institute of Rare Edible and Medicinal Fungi co., Ltd, Guiyang, Guizhou 550025, China.

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Abstract

Gomphus purpuraceus is an ancient wild edible mushroom. However, the niche and lignocellulose degradation system of G. purpuraceus have remained cryptic. In the current study, transcriptome and proteome sequencing of G. purpuraceus in four mediums was performed. A total of 3489 differentially expressed genes (DEGs) and 891 differentially expressed proteins (DEPs) were screened out. For the lignocellulose degradation system, a total of 61 expressed genes were annotated, including 19 genes encoding cellulase, 8 genes encoding hemicellulase, 5 genes encoding pectinase, 22 genes encoding lignin oxidase, and 7 lignin degrading auxiliary enzyme. From two-omics, morphology, and enzyme activities, we speculated that G. purpuraceus might have a limited capacity to degrade polysaccharides (starch and lignocellulose). In addition, trace amount of fumonisins (FB1 and FB2) were found in the G. purpuraceus. These results provided a new perspective for understanding the key pathways and hub genes involved in carbon metabolism of G. purpuraceus development.

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Food Science and Human Wellness
Cite this article:
Geng Y, Zhang S, Liu Y, et al. Transcriptome and proteome analysis reveals the characteristics of carbon metabolism in the mycelial development of Gomphus purpuraceus. Food Science and Human Wellness, 2024, https://doi.org/10.26599/FSHW.2024.9250084

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Received: 18 April 2023
Revised: 11 July 2023
Accepted: 03 September 2023
Available online: 09 May 2024

© Tsinghua University Press 2024

Reprints and Permission requests may be sought directly from editorial office.
Email: nanores@tup.tsinghua.edu.cn

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