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Research Article | Open Access | Just Accepted

Lipidomics and whole-genome sequencing identify lipid profiles in fermented golden pompano (Trachinotus ovatus) inoculated with Bacillus subtilis: Influence of indigenous strains on lipid changes

Yanyan Wua,b,c,d( )Huifang WangaHuan XiangaDi Wanga,c,dChunsheng Lia,c,dShengjun Chena,c,dYongqiang Zhaoa,c,dYueqi Wanga,b,c,d( )

a Key Laboratory of Aquatic Product Processing, Ministry of Agriculture and Rural Affairs, National R&D Center for Aquatic Product Processing, South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou 510300, China

b Guangxi Colleges and Univerisities Key Laboratory Development and High-value Utilization of Buibu Gulf Seafood Resources, College of Food Engineering, Beibu Gulf University, Qinzhou, Guangxi 535000, China

c Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang 222005, China

d Collaborative Innovation Center of Seafood Deep Processing, Dalian Polytechnic University, Dalian 116034, China

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Abstract

Inoculated fermentation enables rapid fermentation of aquatic products. No studies have been conducted on the lipid profiles of inoculated fermented golden pompano (Trachinotus ovatus). In this study, a lipase-producing Bacillus subtilis with salt tolerance was screened from traditionally fermented golden pompano (TF) and used as a starter culture. Whole-genome sequencing analysis revealed it carries four CRISPR structures and two genes encoding triacylglycerol lipase. Untargeted lipidomics identified lipid molecules (833) in six major classes from B. subtilis SCSMX-2 fermented golden pompano (IF). Twenty-eight lipid molecules were upregulated in IF, including phosphatidylcholines (PCs), triacylglycerols (TAGs), and lysophosphatidylcholine. B. subtilis supplementation enhanced the production of polyenyl phosphatidylcholines and medium- and long-chain triacylglycerols. The IF rich in linoleic, docosahexaenoic acids, and eicosapentaenoic acid were primarily distributed in the sn-2 position of DHA, PC and PE. This research revealed the lipid profiles of IF, providing theoretical basis for the application of B. subtilis in the fermented fish industry.

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Food Science and Human Wellness
Cite this article:
Wu Y, Wang H, Xiang H, et al. Lipidomics and whole-genome sequencing identify lipid profiles in fermented golden pompano (Trachinotus ovatus) inoculated with Bacillus subtilis: Influence of indigenous strains on lipid changes. Food Science and Human Wellness, 2024, https://doi.org/10.26599/FSHW.2024.9250141

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Received: 25 December 2023
Revised: 06 October 2023
Accepted: 13 August 2023
Available online: 12 June 2024

© Tsinghua University Press 2024

Reprints and Permission requests may be sought directly from editorial office.
Email: nanores@tup.tsinghua.edu.cn

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