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Protocol | Open Access

Measuring the elasticity of liquid–liquid phase separation droplets with biomembrane force probe

Min Sun1,2Hui Chen1Qinghua Ji1,2Jianhui Xiao1,2Yanzhe Hou3Jizhong Lou1,2( )
Key Laboratory of RNA Biology, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China
University of Chinese Academy of Sciences, Beijing 100049, China
School of Basic Medical Pharmacology, Lanzhou University, Lanzhou 730000, China
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Abstract

Numerous biomacromolecules undergo liquid–liquid phase separation (LLPS) inside living cells and LLPS plays important roles in their functions. The droplets formed by LLPS molecules are complex fluids and their behavior follows fluid mechanics, thus studies on rheological and material properties are required to gain full insight into the biophysical mechanism of these droplets. Biophysical force spectroscopy techniques are particularly useful in this aspect. Indeed, atomic force microscopy and optical tweezers have been used to quantify the elasticity and the viscoelasticity of LLPS droplets. The Biomembrane Force Probe (BFP) is a single-molecule technique designed to investigate liquid-like objects and is more suitable to quantify the material properties of LLPS droplets, but its usage on LLPS droplets is not yet described. Here we present an experimental protocol to measure the Young’s modulus of LLPS droplets using BFP, we believe that the application of BFP on phase separation studies can be expanded and will be very helpful in deciphering the underlying principles of LLPS.

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Biophysics Reports
Pages 68-79
Cite this article:
Sun M, Chen H, Ji Q, et al. Measuring the elasticity of liquid–liquid phase separation droplets with biomembrane force probe. Biophysics Reports, 2022, 8(2): 68-79. https://doi.org/10.52601/bpr.2022.210038

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Received: 02 August 2021
Accepted: 08 February 2022
Published: 25 March 2022
© The Author(s) 2022

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